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 Post subject: Broken MySQL after update.
Unread postPosted: Tue Feb 11, 2014 6:36 pm 
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I just updated my server. This are the packages that were updated:
Feb 11 16:09:41 Updated: 1:asl-3.2.18-37.el6.art.x86_64
Feb 11 16:09:43 Updated: 1:asl-waf-module-3.2.18-37.el6.art.x86_64
Feb 11 16:09:44 Updated: 1:asl-web-3.2.18-37.el6.art.x86_64
Feb 11 16:10:18 Updated: php-common-5.4.25-31.el6.art.x86_64
Feb 11 16:10:22 Updated: php-cli-5.4.25-31.el6.art.x86_64
Feb 11 16:10:23 Installed: ilmbase-1.0.1-6.1.el6.x86_64
Feb 11 16:10:24 Updated: mysql-libs-5.5.36-21.el6.art.x86_64
Feb 11 16:10:28 Updated: mysql-5.5.36-21.el6.art.x86_64
Feb 11 16:10:28 Installed: OpenEXR-libs-1.6.1-8.1.el6.x86_64
Feb 11 16:10:29 Updated: php-pdo-5.4.25-31.el6.art.x86_64
Feb 11 16:10:30 Updated: php-mysql-5.4.25-31.el6.art.x86_64
Feb 11 16:10:32 Updated: ImageMagick-6.5.4.7-7.el6_5.x86_64
Feb 11 16:10:49 Updated: mysql-server-5.5.36-21.el6.art.x86_64
Feb 11 16:10:51 Updated: php-5.4.25-31.el6.art.x86_64
Feb 11 16:10:53 Updated: php-devel-5.4.25-31.el6.art.x86_64
Feb 11 16:10:54 Updated: php-xml-5.4.25-31.el6.art.x86_64
Feb 11 16:10:54 Updated: php-gd-5.4.25-31.el6.art.x86_64
Feb 11 16:10:56 Updated: php-fpm-5.4.25-31.el6.art.x86_64
Feb 11 16:10:57 Updated: php-soap-5.4.25-31.el6.art.x86_64
Feb 11 16:10:57 Updated: php-mcrypt-5.4.25-31.el6.art.x86_64
Feb 11 16:10:58 Updated: php-mbstring-5.4.25-31.el6.art.x86_64
Feb 11 16:10:58 Updated: php-tidy-5.4.25-31.el6.art.x86_64
Feb 11 16:10:59 Updated: php-imap-5.4.25-31.el6.art.x86_64
Feb 11 16:10:59 Updated: atomic-release-1.0-18.el6.art.noarch


And now I have the problem that mysql and libc are "fighting".

*** glibc detected *** /usr/libexec/mysqld: double free or corruption (fasttop): 0x00007f6fc8004a60 ***
======= Backtrace: =========
/lib64/libc.so.6[0x3edb076166]
/usr/libexec/mysqld(_ZN16Security_context7destroyEv+0xb4)[0x561a24]
/usr/libexec/mysqld(_ZN3THDD1Ev+0x13d)[0x5654ad]
/usr/libexec/mysqld(_ZN3THDD0Ev+0x9)[0x565889]
/usr/libexec/mysqld(_Z10unlink_thdP3THD+0x8d)[0x5186bd]
/usr/libexec/mysqld(_Z29one_thread_per_connection_endP3THDb+0x2d)[0x51872d]
/usr/libexec/mysqld(_Z24do_handle_one_connectionP3THD+0x139)[0x61f6b9]
/usr/libexec/mysqld(handle_one_connection+0x5b)[0x61f79b]
/lib64/libpthread.so.0[0x3edb4079d1]
/lib64/libc.so.6(clone+0x6d)[0x3edb0e8b6d]
======= Memory map: ========
00400000-00c6f000 r-xp 00000000 08:02 28532 /usr/libexec/mysqld
00e6e000-00f86000 rw-p 0086e000 08:02 28532 /usr/libexec/mysqld
00f86000-00faf000 rw-p 00000000 00:00 0
...
(lots more)

Is there any known problem?

What is the faster easier fix?

Thanks in advance,

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CentOS release 6.5 (Final)
Plesk psa-11.5.30-cos6.build115130819.13
ASL 3.2.18-37
Linux 2.6.32-358.11.1.el6.x86_64


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 Post subject: Re: Broken MySQL after update.
Unread postPosted: Tue Feb 11, 2014 7:14 pm 
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I saw the same with this MySQL update from the Atomic channel, but only on machines with ASL, and only just after the update was installed. I couldn't reproduce the issue after restarting MySQL again.

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 Post subject: Re: Broken MySQL after update.
Unread postPosted: Wed Feb 12, 2014 10:03 am 
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That was it.

Thanks,

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CentOS release 6.5 (Final)
Plesk psa-11.5.30-cos6.build115130819.13
ASL 3.2.18-37
Linux 2.6.32-358.11.1.el6.x86_64


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 Post subject: Re: Broken MySQL after update.
Unread postPosted: Wed Feb 12, 2014 12:02 pm 
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Ran into the same issue on a Plesk server. Restarting MySQL alone did not fix it, had to bounce the box.


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 Post subject: Re: Broken MySQL after update.
Unread postPosted: Thu Feb 13, 2014 11:00 am 
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Solved, had to restart the whole server, the mysql was out of service badly, couldn't be restarted by itself


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 Post subject: Re: Broken MySQL after update.
Unread postPosted: Tue Feb 18, 2014 3:08 pm 
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I just downgraded back to .33 - seems to be fine after that.


MySQL Error log shows

InnoDB: Unable to lock ./ibdata1, error: 11
InnoDB: Check that you do not already have another mysqld process
InnoDB: using the same InnoDB data or log files.


Which would support that the mysql service needs to be killed manually and restarted.


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 Post subject: Re: Broken MySQL after update.
Unread postPosted: Tue Apr 22, 2014 5:44 am 
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Just updated mysql to:
[root@alien ~]# mysql --version
mysql Ver 14.14 Distrib 5.5.37, for Linux (x86_64) using readline 5.1

and ran into the same problems

140422 10:38:22 InnoDB: Completed initialization of buffer pool
InnoDB: Unable to lock ./ibdata1, error: 11
InnoDB: Check that you do not already have another mysqld process
InnoDB: using the same InnoDB data or log files.
140422 10:38:22 InnoDB: Retrying to lock the first data file

so I had to kill mysqld processes and restart it, it works fine now, apparently.


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 Post subject: Re: Broken MySQL after update.
Unread postPosted: Tue Apr 22, 2014 10:59 am 
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See https://www.atomicorp.com/forum/viewtop ... =24&t=7589

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